p-value: | 1e-10 |
log p-value: | -2.453e+01 |
Information Content per bp: | 1.921 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.92% |
Number of Background Sequences with motif | 14.7 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 57.9 +/- 18.8bp |
Average Position of motif in Background | 59.9 +/- 27.1bp |
Strand Bias (log2 ratio + to - strand density) | -1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TACTAAGAGC --CTAATKGV |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TACTAAGAGC- ------CAGCC |
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ISL2/MA0914.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TACTAAGAGC --TTAAGTGC |
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MEF2B/MA0660.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TACTAAGAGC GCTATAAATAGC |
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Barhl1/MA0877.1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TACTAAGAGC- -GCTAATTGCT |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TACTAAGAGC- --TTAAGTGGN |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACTAAGAGC NTTTTACGAGN |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TACTAAGAGC GTTAACTAGN--- |
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MEF2D/MA0773.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TACTAAGAGC ACTATAAATAGA |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TACTAAGAGC- --TTAAGTGGT |
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