Information for 20-YTTCCMWGKKGTTAWT (Motif 40)

A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T C G T A C G T A A G T C G T C A G T A C A G T C C G A T A C G T A C T G A C T G C G T A C G T A C T G A
p-value:1e-6
log p-value:-1.518e+01
Information Content per bp:1.845
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 24.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YTTCCMWGKKGTTAWT
------AGGTGTTAAT
 A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YTTCCMWGKKGTTAWT
ATTTTCCATT--------
 A C G T A C G T A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:YTTCCMWGKKGTTAWT---
----NCNTTTGTTATTTNN
 A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-YTTCCMWGKKGTTAWT
TTTTCCA----------
 A C G T A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:YTTCCMWGKKGTTAWT
-----AAGGTGTKAA-
 A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--YTTCCMWGKKGTTAWT
ATTTTCCATT--------
 A C G T A C G T A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-YTTCCMWGKKGTTAWT
HTTTCCCASG-------
 A C G T A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YTTCCMWGKKGTTAWT
TTTCCCAGAAN-----
 A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YTTCCMWGKKGTTAWT
NANTTTCAAGTGGTTAN-
 A C G T A C G T A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--YTTCCMWGKKGTTAWT
ATTTTCCATT--------
 A C G T A C G T A G C T A C G T A C G T A G T C A G T C T G A C C G T A A C T G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T