Information for 23-TKTTRATWCRGGA (Motif 39)

A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G C T C T A G C G A T C G T A A C G T A G T C C G T A C G T A G T A C G T C A
p-value:1e-6
log p-value:-1.518e+01
Information Content per bp:1.878
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 24.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TKTTRATWCRGGA
-TTTAAT------
 A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TKTTRATWCRGGA
NNNTTTNTAATACNG--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TKTTRATWCRGGA
ATATTAATTAA---
 A C G T A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TKTTRATWCRGGA
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKTTRATWCRGGA
TGTGGATTNNN--
 A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TKTTRATWCRGGA
TGTTTACTTAGG-
 A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TKTTRATWCRGGA
-NTTGATACATT-
 A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TKTTRATWCRGGA
TTGTTTAC------
 A C G T A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TKTTRATWCRGGA---
--CAAATTCCGGAACC
 A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TKTTRATWCRGGA
NTGTTTAYATWW--
 A C G T A C G T A C T G A C G T A C G T C T A G C G T A A C G T C G T A A G T C C T G A A C T G A C T G C G T A
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T