Information for 19-CAAGCACATGCWAAGA (Motif 35)

A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
Reverse Opposite:
A C G T T A G C A C G T A C G T C G A T A T C G G A T C G C T A A C G T C T A G A C G T A T C G A T G C C A G T A C G T C T A G
p-value:1e-7
log p-value:-1.827e+01
Information Content per bp:1.749
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 23.5bp
Average Position of motif in Background71.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAAGCACATGCWAAGA
-AAGCACATGG-----
 A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAAGCACATGCWAAGA
NWAACCACADNN-----
 A C G T A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAGCACATGCWAAGA
AAACCACANN------
 A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAGCACATGCWAAGA
AAACCACAGAN-----
 A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAGCACATGCWAAGA
AAACCACAGC------
 A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGCACATGCWAAGA
NAAACCACAG-------
 A C G T A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAGCACATGCWAAGA
CCAGGAACAG-------
 A C G T A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAGCACATGCWAAGA
CGAAGCACACAAAATA-
 A C G T A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAGCACATGCWAAGA
AGCGGCACACACGCAA-
 A C G T A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAAGCACATGCWAAGA--
-----ATATGCAAATNNN
 A G T C G T C A G T C A A T C G A T G C C G T A G A T C C G T A C A G T C T A G T A G C C G T A G T C A C G T A A T C G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A