Information for 13-TTRCTAGWTTACA (Motif 25)

A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
Reverse Opposite:
C G A T T A C G G A C T C G T A G T C A C G T A T A G C A C G T C G T A A C T G A G C T G T C A C G T A
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.712
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif51.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.1 +/- 30.9bp
Average Position of motif in Background49.7 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTRCTAGWTTACA
GANGTTAACTAGTTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTRCTAGWTTACA
KGTTGCTAGGMAACA
 A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTRCTAGWTTACA---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTRCTAGWTTACA
--ACTAGTTAAC-
 A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TTRCTAGWTTACA--
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTRCTAGWTTACA
TTTCCTAGAAAGCA
 A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTRCTAGWTTACA
CTAAGGTTCTAGATCAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTRCTAGWTTACA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTRCTAGWTTACA
NCCGTTGCTANGNGN--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTRCTAGWTTACA
NNCGTTGCTATGGNN--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C A C G T C G T A A C T G G C A T A C G T A C G T C T G A A G T C C G T A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T