Information for 3-GGAAGGGTAT (Motif 23)

A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T
Reverse Opposite:
G T C A A C G T C G T A A G T C A G T C A T G C A C G T A G C T G T A C A G T C
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif88.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets61.7 +/- 29.8bp
Average Position of motif in Background47.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GGAAGGGTAT---
--AAGGATATNTN
 A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGAAGGGTAT
TGGAACAGMA-
 A C G T A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGAAGGGTAT--
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAAGGGTAT-------
AATAGGGTATCAATATT
 A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAAGGGTAT-------
AATAGGGTATCATATAT
 A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAAGGGTAT
TGGGGAAGGGCM-
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGAAGGGTAT
ACCGGAAG-----
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAAGGGTAT-------
GATGGGGTATCATTTTT
 A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAAGGGTAT-------
GATAGGGTATCACTAAT
 A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAAGGGTAT-------
GATAGGGTATCACTAAT
 A C T G A C T G C T G A C G T A T A C G A C T G C T A G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T