Information for 5-AGAAWCTCCAATA (Motif 18)

G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A
Reverse Opposite:
A G C T T C G A A C G T A C G T C T A G A T C G C G T A A C T G C G T A A C G T A C G T T G A C C A G T
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.768
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.9 +/- 26.7bp
Average Position of motif in Background54.0 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGAAWCTCCAATA----
-------CCAATAAAAA
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGAAWCTCCAATA----
-------CCAATAAAAC
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAAWCTCCAATA-
GGCAAAAGTCCAATAA
 A C G T A C G T G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGAAWCTCCAATA--------
-------CTAATATTGCTAAA
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGAAWCTCCAATA--------
-------CTAATATTGCTAAA
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

HOXA5/MA0158.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGAAWCTCCAATA
-----CACTAATT
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAAWCTCCAATA---
-NNNTTTNTAATACNG
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T
A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGAAWCTCCAATA----
-------CCAATAAAAA
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAWCTCCAATA--
---AGATGCAATCCC
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAAWCTCCAATA-------
----AACCCAATAAAATTCG
 G T C A A C T G T G C A G T C A G C A T A G T C C G A T A T G C A G T C C G T A C G T A A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G