Information for 14-GGRTTTWTGRCCTCGR (Motif 17)

A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
Reverse Opposite:
G A C T A G T C T A C G C G T A A C T G A C T G A G C T A G T C T C G A C G A T T C G A C G T A C G T A A G C T A G T C A G T C
p-value:1e-11
log p-value:-2.711e+01
Information Content per bp:1.714
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 5.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR-
-------TGACCTTGAN
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR-
-------TGACCTTGAV
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR
-----NATGACCTTGA
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
A C G T A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR
------ATGACCTTGA
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR-
------ATGACCTTGAA
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGRTTTWTGRCCTCGR
------NTGACCTTGA
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR
-----BNTGDCCTTG-
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR---
--NNNNATGACCTTGANTN
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A A C G T A C G T A C G T
A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGRTTTWTGRCCTCGR
AGGTCANTGACCTN--
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGRTTTWTGRCCTCGR
TGATTTATGGCC----
 A C T G A C T G C T G A A C G T G A C T A C G T C G T A A G C T C T A G C T G A G T A C A G T C A C G T A G T C T C A G C T G A
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T A C G T