Information for 12-TRACTCTAATCCTTTA (Motif 15)

A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C T G C T A G C G T A A G C T A C G T C G T A A C T G C G T A A C T G A C G T A G C T C G T A
p-value:1e-11
log p-value:-2.711e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.4 +/- 23.8bp
Average Position of motif in Background58.3 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0035.1_Gsc/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA-
AATCGTTAATCCCTTTA
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TRACTCTAATCCTTTA
-----CTAATCCTCTT
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA
----NYTAATCCYB--
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA
----GCTAATCCCC--
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TRACTCTAATCCTTTA
-----YTAATCCY---
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA
----GCTAATCC----
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA
-----TTAATCCT---
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA
----CCTAATCCGC--
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TRACTCTAATCCTTTA
-----NTAATKGTTT-
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TRACTCTAATCCTTTA
-----TTAATCCC---
 A C G T C T A G G T C A A G T C A C G T A G T C A C G T C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T