Information for 10-TGTTGGATCAGGTCAH (Motif 12)

C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
Reverse Opposite:
C T G A C G A T A C T G G C T A A G T C A G T C A G C T A T C G G C T A C A G T A G T C G T A C G T C A T C G A T G A C C G T A
p-value:1e-13
log p-value:-3.011e+01
Information Content per bp:1.678
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 16.2bp
Average Position of motif in Background26.2 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.72
Offset:7
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH
-------TRAGGTCA-
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.67
Offset:9
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH
---------AGGTCA-
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:8
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH
--------AAGGTCAC
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.64
Offset:7
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH
-------AGRGGTCA-
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGTTGGATCAGGTCAH
----NGATGACGTCAT
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
A C G T A C G T A C G T A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH---
------CAAAGGTCAAGGG
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH
-----ATCAAGGTCA-
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH-
--AAAGATGATGTCATC
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T A C G T
A C G T A C G T C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH---
---TCTCAAAGGTCACGAG
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTTGGATCAGGTCAH---
---TCTCAAAGGTCACCTG
 C G A T A C T G A C G T C A G T A C T G T A C G G T C A C G A T T A G C C T G A A C T G T A C G C G A T G T A C G C T A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G