Information for 9-KCCCTYTCCTTGCCAC (Motif 10)

A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
Reverse Opposite:
T C A G A G C T C A T G A C T G T A G C G T C A C T G A A C T G C T A G G T C A C T G A C G T A C A T G T A C G A T C G G T A C
p-value:1e-13
log p-value:-3.066e+01
Information Content per bp:1.656
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets57.2 +/- 20.2bp
Average Position of motif in Background47.3 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KCCCTYTCCTTGCCAC-
--TGTTKCCTAGCAACM
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C A C G T
A C G T A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:KCCCTYTCCTTGCCAC
NNACTTGCCTT-----
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:KCCCTYTCCTTGCCAC
--------CTTGGCAA
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:KCCCTYTCCTTGCCAC
--GCATTCCAGN----
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----KCCCTYTCCTTGCCAC
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:KCCCTYTCCTTGCCAC
--RCATTCCWGG----
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:KCCCTYTCCTTGCCAC
-NNNTTTCCTGGAAA-
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:KCCCTYTCCTTGCCAC
---NCTTCCCGCCC--
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:KCCCTYTCCTTGCCAC
-CACATTCCAT-----
 A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----KCCCTYTCCTTGCCAC
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A T G C G T A C C G A T A G C T A C G T A G T C G T A C A G C T A C G T A T C G G T A C G T A C C T G A A G T C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T