Information for 1-TAAGCATAGWGGTTTA (Motif 1)

C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
Reverse Opposite:
A G C T C T G A G T C A G T C A G T A C G T A C C G T A A G T C C G A T C T G A A C G T A C T G G T A C C G A T C G A T C G T A
p-value:1e-17
log p-value:-4.080e+01
Information Content per bp:1.730
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 19.4bp
Average Position of motif in Background41.7 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCATAGWGGTTTA
ATTTGCATA--------
 A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCATAGWGGTTTA
ATTTGCATA--------
 A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAAGCATAGWGGTTTA
TCTAAAAATAGA------
 A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAAGCATAGWGGTTTA
AAAATATGCATAATAAA---
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAAGCATAGWGGTTTA
ACTATAAATAGA------
 A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TAAGCATAGWGGTTTA
BTVATTWGCATA--------
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TAAGCATAGWGGTTTA
AATTTGCATANT------
 A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TAAGCATAGWGGTTTA
GCTATAAATAGC------
 A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGCATAGWGGTTTA
TNTAATTTGCATANNN-----
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGCATAGWGGTTTA
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A C T G G T A C C G T A A G C T C G T A A C T G C G A T C A T G A C T G A C G T A C G T A G C T C T G A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T