Information for 1-CTGGCGRGCTCCC (Motif 5)

A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G C T A G C G T A A C T G T G A C A G T C A G T C A C T G G T A C A T G C T G C A A C T G
p-value:1e-13
log p-value:-3.212e+01
Information Content per bp:1.786
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.5 +/- 24.1bp
Average Position of motif in Background50.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGGCGRGCTCCC-
CTGGCAGNCTGCCA
 A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGGCGRGCTCCC
CTCTCGCGAGATCTG
 A C G T A C G T A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CTGGCGRGCTCCC
-------GCTTCC
 A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCGRGCTCCC
GTTCTCGCGAGANCC-
 A C G T A C G T A C G T A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CTGGCGRGCTCCC
-------GCTCCG
 A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGGCGRGCTCCC
---CNGTCCTCCC
 A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCGRGCTCCC-
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGGCGRGCTCCC
--GGCGCGCT---
 A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGGCGRGCTCCC
---GGGGATTTCC
 A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGGCGRGCTCCC--
CTTGGCANNNTGCCAA
 A C G T A G T C A C G T A T C G A C T G T A G C A C T G T C A G A C T G A G T C A C G T A G T C A G T C A T G C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A