Information for 4-TTCTGCCCKTGTGTCR (Motif 4)

A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
Reverse Opposite:
A G T C C T A G T G C A T A G C G C T A T A G C T C G A G T A C A T C G C A T G C A T G A T G C G C T A A C T G T G C A T G C A
p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.608
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets41.0 +/- 24.7bp
Average Position of motif in Background54.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCTGCCCKTGTGTCR
--CTGCCCGCA-----
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTCTGCCCKTGTGTCR
-GCTGTG---------
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTCTGCCCKTGTGTCR
VBSYGTCTGG----------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTCTGCCCKTGTGTCR
-GCTTCC---------
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TTCTGCCCKTGTGTCR
---TGCCCTGAGGGCA
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TTCTGCCCKTGTGTCR
--ATGCCCACC-----
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTCTGCCCKTGTGTCR
TWGTCTGV----------
 A C G T A C G T A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTCTGCCCKTGTGTCR
--CTGACCTTTG----
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCTGCCCKTGTGTCR
---TGACCTTGAV---
 A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTCTGCCCKTGTGTCR
CTGTCTGG----------
 A C G T A C G T A C G T A C G T A G T C C A G T A T C G G A T C G T A C T A G C A C T G A G C T A T C G C G A T A T C G A C G T G A T C C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T