Information for 17-GCCTTAGCTAAGG (Motif 35)

A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A T G C
p-value:1e-3
log p-value:-8.972e+00
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 10.5bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCTTAGCTAAGG--
NNCGTTGCTATGGNN
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCTTAGCTAAGG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCTTAGCTAAGG-
CCGCATAGCAACGGA
 A C G T A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCTTAGCTAAGG
--ACTAGTTAAC-
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCCTTAGCTAAGG--
-----NNATAAGGNN
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCTTAGCTAAGG
NCCTTATCTG---
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCCTTAGCTAAGG
-TCTTATCT----
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCCTTAGCTAAGG
-YCTTATCTBN--
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCCTTAGCTAAGG-
----NAGATAAGNN
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCCTTAGCTAAGG--
NNNGTAACTANGNNA
 A T C G A G T C A G T C A C G T A C G T C T G A A C T G A G T C A G C T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A