Information for 3-CCAGCRCCYCACAGCC (Motif 3)

A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A G C T A T C G C G A T A T C G C T G A A C T G A C T G A G C T C T A G A T G C A C G T A T C G A C T G
p-value:1e-14
log p-value:-3.266e+01
Information Content per bp:1.768
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.1 +/- 21.2bp
Average Position of motif in Background35.9 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCAGCRCCYCACAGCC
----TGCCCCCGGGCA
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:11
Orientation:forward strand
Alignment:CCAGCRCCYCACAGCC
-----------CAGCC
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCAGCRCCYCACAGCC
----TGCCCCAGGGCA
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCAGCRCCYCACAGCC
----TGCCCCAGGGCA
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAGCRCCYCACAGCC
ATCCCCGCCCCTAAAA-
 A C G T A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CCAGCRCCYCACAGCC--
----CCCCCTTGGGCCCC
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCAGCRCCYCACAGCC-
---TTGCCCTAGGGCAT
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C A C G T
A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCRCCYCACAGCC
NNNNGGTACCCCCCANN-
 A C G T A C G T A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:CCAGCRCCYCACAGCC
---------CACAGN-
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCAGCRCCYCACAGCC-
---CCGCCCAAGGGCAG
 A G T C A T G C T G C A A T C G A G T C C T G A A G T C A G T C A G C T A T G C G C T A T A G C C T G A A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G