Information for 15-CCGCBAGCGGGGACTG (Motif 29)

A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
Reverse Opposite:
A G T C G C T A A C T G G A C T A G T C A G T C A T G C A T G C A C T G G T A C A G C T T G A C A T C G T A G C A T C G A T C G
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.688
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif118.3
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.4 +/- 24.7bp
Average Position of motif in Background54.3 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCBAGCGGGGACTG---
GCCASCAGGGGGCGCYVNNG
 A C G T A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCGCBAGCGGGGACTG
---CWGGCGGGAA---
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGCBAGCGGGGACTG
----TGGCGGGAAAHB
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGCBAGCGGGGACTG
----GGGCGGGAAGG-
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGCBAGCGGGGACTG-
---ANTGCGGGGGCGGN
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G A C G T
A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCGCBAGCGGGGACTG
-----GGCGGGAARN-
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGCBAGCGGGGACTG
--BTKGGCGGGAAA--
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCGCBAGCGGGGACTG
-----GGCGGGAAAH-
 A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGCBAGCGGGGACTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCGCBAGCGGGGACTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T G C A T G C A T C G A T G C A C G T T C G A A C T G T A G C A T C G A T C G C T A G T A C G C G T A T A G C C G A T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A