Information for 6-GCCGCTTCTSGST (Motif 19)

A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
Reverse Opposite:
G C T A A T G C A T G C A T C G C T G A C T A G C T G A C T G A A C T G A G T C A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.804
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 21.0bp
Average Position of motif in Background52.5 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCGCTTCTSGST
NCCACTTCCGG--
 A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCTTCTSGST
AGCAGCTGCT----
 A C G T A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCGCTTCTSGST
GCCCCGCCCCCTCCC
 A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

ELK4/MA0076.2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCCGCTTCTSGST
-CCACTTCCGGC-
 A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCGCTTCTSGST
---GCTTCC----
 A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCCGCTTCTSGST
--NGCTN------
 A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTTCTSGST
AGCAGCTGCTNN--
 A C G T A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTTCTSGST
CGCAGCTGCG----
 A C G T A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCCGCTTCTSGST
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGCTTCTSGST
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G C T A G C T A G T C A G C T A T C G A T C G T A C G C G A T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T