Information for 1-GCGGTTGTGA (Motif 18)

A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T T G A C C G T A A G T C G T C A T C G A A G T C A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.862
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif103.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets58.7 +/- 26.4bp
Average Position of motif in Background52.6 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCGGTTGTGA
GGCVGTTR---
 A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTGTGA
TTGCGGTTT---
 A C G T A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTTGTGA--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTGTGA---
GTNTTGTTGTGANNT
 A C G T A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTTGTGA
TTTGCGGTTT---
 A C G T A C G T A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGGTTGTGA
--AGGTGTGA
 A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTGTGA
BRRCVGTTDN--
 A C G T A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGGTTGTGA-
-CCATTGTTNY
 A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGGTTGTGA
--AGGTGTGA
 A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCGGTTGTGA
TGGCAGTTGG--
 A C G T A C G T A C T G A G T C C T A G C T A G A G C T A C G T A C T G A C G T A C T G C T G A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T