Information for 12-CTGGTTAGCAAAGGCT (Motif 17)

A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A C T A G G T A C G T A C A G C T A C G T A C G T A C T G A T G C G C A T C G T A T G C A G T A C A G T C C G T A C T A G
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.815
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 28.5bp
Average Position of motif in Background37.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGGTTAGCAAAGGCT---
NNNGGGHAGCAHRTGCTRCC
 A C G T A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGGTTAGCAAAGGCT
------AACAAAGG--
 A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGGTTAGCAAAGGCT
CCGCATAGCAACGGA-
 A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGGTTAGCAAAGGCT
NYYTGTTTACHN------
 A C G T A C G T A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTTAGCAAAGGCT
NGTAGGTTGGCATNNN--
 A C G T A C G T A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CTGGTTAGCAAAGGCT
------RACAAWGG--
 A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGGTTAGCAAAGGCT
-NATGTTGCAA-----
 A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGGTTAGCAAAGGCT
CTGTTTAC--------
 A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CTGGTTAGCAAAGGCT
TCCTGTTTACA-------
 A C G T A C G T A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTGGTTAGCAAAGGCT
----TTGCCAAG----
 A G T C A C G T A C T G C A T G A C G T A C G T C G T A A T C G A G T C C G T A C G T A C T G A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T