Information for 10-GCTCAAATTGTTTTAA (Motif 12)

C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A
Reverse Opposite:
A C G T C G A T C T G A C G T A C G T A C G T A G T A C C G T A C G T A A C G T G C A T A C G T T A C G C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.719
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.6 +/- 21.3bp
Average Position of motif in Background58.1 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTCAAATTGTTTTAA--
--TTCAATTGTTCTAAAA
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A A C G T A C G T
A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox11/MA0869.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTCAAATTGTTTTAA
AACACTGAAATTGTT----
 A C G T A C G T A C G T C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCTCAAATTGTTTTAA
------ATTGTTA---
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTCAAATTGTTTTAA-
-NNTTTATTGTTCTNNN
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A A C G T
A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCTCAAATTGTTTTAA--
----TAATTGTTCTAAAC
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCTCAAATTGTTTTAA
------ATTGTTTAN-
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTCAAATTGTTTTAA-
---AAAATTGTTATGAA
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTCAAATTGTTTTAA-
GGAAAAATTGTTAGGAA
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTCAAATTGTTTTAA
AACACTGCAATTGTTC---
 A C G T A C G T A C G T C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTCAAATTGTTTTAA--
-CNNNTATTGTTCNNNNN
 C T A G A G T C A C G T A G T C C G T A C G T A G T C A G A C T C G A T A C T G A C G T C G A T G A C T G A C T C G T A G T C A A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A