Information for 2-CARGATGGCGGCGCGC (Motif 4)

A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
Reverse Opposite:
A T C G T G A C A T C G G T A C A C T G A G T C A T G C A C T G G T A C A T G C G T C A A G C T A G T C G A C T A C G T C T A G
p-value:1e-12
log p-value:-2.822e+01
Information Content per bp:1.798
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 13.6bp
Average Position of motif in Background55.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CARGATGGCGGCGCGC
CAAGATGGCGGC----
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CARGATGGCGGCGCGC
CAAGATGGCGGC----
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CARGATGGCGGCGCGC-
NAGANTGGCGGGGNGNA
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CARGATGGCGGCGCGC
--TAATGGCGGNC---
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CARGATGGCGGCGCGC
--RGKGGGCGGAGC--
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CARGATGGCGGCGCGC
---GGGGGCGGGGCC-
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CARGATGGCGGCGCGC
GGGNGGGGGCGGGGC--
 A C G T A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CARGATGGCGGCGCGC
--AGGGGGCGGGGCTG
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:CARGATGGCGGCGCGC-
---------GGCGCGCT
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CARGATGGCGGCGCGC
---GGGGGCGGGGC--
 A G T C G T C A C T G A C T A G C T G A A C G T A T C G A C T G A G T C A T C G A C T G G T A C A C T G A T G C A C T G A T G C
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T