Information for 7-GKKSCCAGRCTTG (Motif 15)

A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C A G T C A G C T A C T G A C T G A T G C G T A C G T C A A T G C
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.7 +/- 19.8bp
Average Position of motif in Background41.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GKKSCCAGRCTTG-
ATGCCCGGGCATGT
 A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GKKSCCAGRCTTG
-TGCCCAGNHW--
 A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GKKSCCAGRCTTG
AGGTGHCAGACA--
 A C G T A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GKKSCCAGRCTTG----
--TCCCAGMCRAGCCCC
 A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GKKSCCAGRCTTG
GGGGCCGAGGCCTG
 A C G T A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GKKSCCAGRCTTG
----BCAGACWA-
 A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GKKSCCAGRCTTG---
CAAATCCAGACATCACA
 A C G T A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GKKSCCAGRCTTG
AGGTGNCAGACAG-
 A C G T A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GKKSCCAGRCTTG-
----CCAGACRSVB
 A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GKKSCCAGRCTTG
----CCAGACAG-
 A T C G A C G T A C T G A T C G A G T C G T A C C T G A A C T G T C A G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T