p-value: | 1e-9 |
log p-value: | -2.297e+01 |
Information Content per bp: | 1.851 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.25% |
Number of Background Sequences with motif | 40.5 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 51.1 +/- 29.9bp |
Average Position of motif in Background | 45.2 +/- 36.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCCTAGCGAC-- SCCTAGCAACAG |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCCTAGCGAC- TGTTKCCTAGCAACM |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCCTAGCGAC--- TACCATAGCAACGGT |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCCTAGCGAC--- CCGCATAGCAACGGA |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------TCCTAGCGAC------- TGTGACCCTTAGCAACCGATTAA |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------TCCTAGCGAC GATAACATCCTAGTAG- |
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EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCCTAGCGAC- TCCCNNGGGACN |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCCTAGCGAC GTTGCCATGGCAAC |
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EBF1/MA0154.3/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCCTAGCGAC- ATTCCCAAGGGAAT |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCCTAGCGAC--- TACCCTAGTTACCGA |
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