Information for 4-ACGTGGACKTGTGTGG (Motif 4)

G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
Reverse Opposite:
G T A C A T G C G C T A G T A C C T G A T A G C C G T A G T C A T A C G A C G T G T A C A G T C C G T A A G T C T C A G A C G T
p-value:1e-13
log p-value:-3.086e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 17.6bp
Average Position of motif in Background19.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:ACGTGGACKTGTGTGG----
--------NNHTGTGGTTWN
 G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ACGTGGACKTGTGTGG---
--------GTCTGTGGTTT
 G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACGTGGACKTGTGTGG
CACGTG-----------
 A C G T G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACGTGGACKTGTGTGG----
----NNGCGTGTGTGCNGCN
 G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACGTGGACKTGTGTGG
NVCACGTG-----------
 A C G T A C G T A C G T G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACGTGGACKTGTGTGG
GGACGTGC----------
 A C G T A C G T G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:ACGTGGACKTGTGTGG----
----NNNNTTGTGTGCTTNN
 G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACGTGGACKTGTGTGG
GNCACGTG-----------
 A C G T A C G T A C G T G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACGTGGACKTGTGTGG
-BNTGDCCTTG-----
 G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACGTGGACKTGTGTGG
GCACGTGT----------
 A C G T A C G T G T C A A G T C A C T G A C G T A C T G C A T G T C G A A T G C C A G T A C G T A C T G A G C T A C T G C G A T A T C G C A T G
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T