Information for 20-BCGMCASGCTGGT (Motif 39)

A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T
Reverse Opposite:
T C G A T A G C A G T C T C G A C T A G A T G C T A C G A C G T A T C G A C G T T A G C C A T G T G A C
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.596
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.55%
Number of Background Sequences with motif915.8
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets46.2 +/- 25.4bp
Average Position of motif in Background51.0 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:BCGMCASGCTGGT-
----CCTGCTGAGH
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:BCGMCASGCTGGT--
----CATGCGGGTAC
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:BCGMCASGCTGGT
------NGCTN--
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:BCGMCASGCTGGT---
-TCNCCTGCTGNGNNN
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:BCGMCASGCTGGT
----CACGCA---
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:BCGMCASGCTGGT----
-NNNNATGCGGGTNNNN
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:BCGMCASGCTGGT-
----TATGCGGGTA
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-BCGMCASGCTGGT-
GGCCYCCTGCTGDGH
 A C G T A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:BCGMCASGCTGGT---
-NNTCCTGCTGTGNNN
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:BCGMCASGCTGGT
-------GCTGTG
 A C G T G T A C A T C G T G C A T A G C T G C A A T G C T A C G A G T C A C G T A C T G A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G