Information for 6-GGGCAGCCCC (Motif 35)

A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C A C G T C T A G A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.529e+01
Information Content per bp:1.928
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif81.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets52.4 +/- 24.8bp
Average Position of motif in Background51.5 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAGCCCC
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGCCCC
TNNGGGCAG----
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGCCCC
GGGGGAATCCCC
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGCCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGCCCC
NGTGGGCAT----
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGCAGCCCC
GGGCGGGACC
 A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGCCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCAGCCCC
GGAAATCCCC
 A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGCCCC----
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGCAGCCCC--
GGGAAATCCCCN
 A C T G A C T G A C T G A G T C C G T A A C T G G T A C G T A C A G T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T