Information for 5-AAAATATAADCCG (Motif 12)

C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G
Reverse Opposite:
A G T C A T C G A C T G G A C T C G A T A C G T C G T A A C G T C G T A A G C T A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.4 +/- 10.0bp
Average Position of motif in Background29.8 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAATATAADCCG-
TAAGATTATAATACGG
 A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAAATATAADCCG
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAATATAADCCG
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAATATAADCCG-
TATAATTATAATATTC
 A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAAATATAADCCG-
NNTAATTATAATNANN
 A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAAATATAADCCG
-----TTAATCCG
 C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAAATATAADCCG
AGCCGAAAAAAAAAT---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAATATAADCCG-
GCTAATTATAATTATC
 A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAAATATAADCCG
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAATATAADCCG-
TCTTTATATATAAATA
 A C G T A C G T C G T A C G T A C G T A C T G A A C G T C G T A A C G T C G T A C G T A C A G T A G T C A T G C C T A G A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A