Information for 4-GTTTGCAGAACGC (Motif 6)

A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G A G C T A C G T A T G C A C G T A C T G A G T C C G T A C G T A G T C A A G T C
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 27.1bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTTGCAGAACGC
-VTTRCATAAY--
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTTGCAGAACGC
-ATTGCACAATA-
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTTGCAGAACGC
ATTTGCATAA---
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCAGAACGC-
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTTTGCAGAACGC--
-TTTGCACACGGCAC
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C A C G T A C G T
A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTTTGCAGAACGC
GGGCCGTGTGCAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTTTGCAGAACGC
ATTTGCATAT---
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTTGCAGAACGC
-ATTGCGCAAC--
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTTTGCAGAACGC-
CAATTGCAAAAATAT
 A C G T A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTTGCAGAACGC
-ATTGCATAA---
 A C T G A C G T A C G T A C G T A C T G A G T C C G T A A T C G C G T A C T G A A G T C A T C G A G T C
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T