Information for 2-GCCTGCGATTAGGTTG (Motif 5)

T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
Reverse Opposite:
A T G C C T G A T C G A A T G C T G A C A C G T T G C A T G C A C G A T A G T C C T A G T A G C T C G A C T A G A T C G A G T C
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.715
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.1 +/- 26.7bp
Average Position of motif in Background50.7 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCGATTAGGTTG
GCGCCTGCGCA-------
 A C G T A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCCTGCGATTAGGTTG
-GCTGTG---------
 T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGCGATTAGGTTG
ANTGCCTGAGGCAAN----
 A C G T A C G T A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GCCTGCGATTAGGTTG
ATTGCCTGAGGCAAT----
 A C G T A C G T A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCGATTAGGTTG
TGCCTGAGGCN------
 A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCGATTAGGTTG
TTGCGTGCVA--------
 A C G T A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCGATTAGGTTG
NGCCTGAGGCN------
 A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----GCCTGCGATTAGGTTG
CTGCGCATGCGC--------
 A C G T A C G T A C G T A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCGATTAGGTTG
NGCCTNAGGCN------
 A C G T T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.45
Offset:2
Orientation:reverse strand
Alignment:GCCTGCGATTAGGTTG
--TTGCGGTTT-----
 T C A G A T G C A G T C A G C T A T C G G A T C A C T G C G T A A C G T A C G T G T C A A C T G A T C G A G C T A G C T A T C G
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T