Information for 22-CTCTAGAGGC (Motif 40)

G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C
Reverse Opposite:
A C T G G T A C A G T C C G A T A T G C C A G T C G T A A T C G C T G A A C T G
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.834
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets50.5 +/- 34.9bp
Average Position of motif in Background38.9 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCTAGAGGC
BTBRAGTGSN
 G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCTAGAGGC---
NGNTCTAGAACCNGV
 A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCTAGAGGC---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCTAGAGGC
CTYRAGTGSY
 G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CTCTAGAGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------CTCTAGAGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGAGGC
TGTCTAGACG-
 A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------CTCTAGAGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCTAGAGGC---
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAGAGGC
GGCTCYAKCAYC
 A C G T A C G T G T A C A G C T A T G C C G A T G C T A A T C G G C T A A C T G A C T G T A G C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C