Information for 19-AACCCACTGT (Motif 35)

T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T
Reverse Opposite:
C G T A A G T C C T G A A T C G C G A T A C T G C T A G T A C G A G C T A C G T
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.833
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.5 +/- 30.3bp
Average Position of motif in Background29.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACCCACTGT
-ATCCAC---
 T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AACCCACTGT-
---CCTTTGTT
 T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACCCACTGT--
--NCCATTGTTC
 T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AACCCACTGT---
---CCATTGTTYB
 T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACCCACTGT-----
TGTTCCCATTGTGTACT
 A C G T A C G T T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACCCACTGT------
AATCGCACTGCATTCCG
 A C G T T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACCCACTGT----
CGACCAACTGCCGTG
 A C G T T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AACCCACTGT
SSAATCCACANN
 A C G T A C G T T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACCCACTGT
AGGVNCCTTTGT
 A C G T A C G T T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACCCACTGT-
AAACCACAGAN
 T C G A T C G A A G T C A G T C A G T C C G T A A T G C A G C T A C T G G A C T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C