Information for 10-GCGTCGTTTG (Motif 23)

A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A T G C A C T G T C G A A G T C A C T G A T G C
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.879
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.7 +/- 25.8bp
Average Position of motif in Background29.1 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGTCGTTTG----
TCCGTCGCTTAAAAG
 A C G T A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCGTCGTTTG----
----CCTTTGTTTT
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCGTCGTTTG--
----CCWTTGTY
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCGTCGTTTG--
----CCTTTGTT
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGTCGTTTG----
GTGCCGTGTGCAAA
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCGTCGTTTG----
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCGTCGTTTG--
--ANCGTTTANN
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCGTCGTTTG----
----CCTTTGAWGT
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTCGTTTG-
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCGTCGTTTG----
----CCTTTGATGT
 A T C G A G T C C T A G A C G T A G T C A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T