Information for 3-AGGGTGCGCA (Motif 13)

C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A
Reverse Opposite:
A G C T A C T G A T G C A C T G A G T C C G T A A T G C A G T C T A G C C G A T
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets43.3 +/- 29.4bp
Average Position of motif in Background53.6 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGCGCA--
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGCGCA--
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGGGTGCGCA---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGCGCA-----
GGGTGTGCCCAAAAGG
 A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGCGCA
GCGCCTGCGCA
 A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGCGCA---
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGCGCA----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGCGCA-----
TGGCGCGCGCGCCTGA
 A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGGGTGCGCA----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTGCGCA-----
TTNGGGTACGCCNNANN
 A C G T A C G T C G T A A C T G A C T G A T C G A C G T A C T G G T A C T A C G A G T C T C G A A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A