Information for 1-GCAGKGAGCSWGYMCT (Motif 1)

C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
Reverse Opposite:
C G T A C T A G A C T G T C G A A G T C C G A T T A C G A T C G A T G C A C G T A G T C G T A C A G T C A G C T A C T G A G T C
p-value:1e-17
log p-value:-4.058e+01
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.6 +/- 24.6bp
Average Position of motif in Background47.8 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGKGAGCSWGYMCT
TCAGNGAGCGTGAC--
 C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGKGAGCSWGYMCT
---CGGAGC-------
 C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCAGKGAGCSWGYMCT-
NAAGGGGGCGTGGCTTN
 C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCAGKGAGCSWGYMCT
NNNTTAGGTAGCNTNT---
 A C G T A C G T A C G T C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCAGKGAGCSWGYMCT
TGGCAGNCTGCCAG----
 A C G T A C G T C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCAGKGAGCSWGYMCT
-AAGGGGGCGTGGCC-
 C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCAGKGAGCSWGYMCT
ACAGGAAGTG------
 C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAGKGAGCSWGYMCT
NNTGTAGGTAGCANNT---
 A C G T A C G T A C G T C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCAGKGAGCSWGYMCT
-----CAGCC------
 C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCAGKGAGCSWGYMCT
NNNAAGGGGGCGGGNNN-
 A C G T A C G T C T A G A G T C C T G A A C T G A C T G A C T G C G T A A T C G A T G C A T G C C G T A A C T G A G C T G T A C A G T C C G A T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T