Information for 15-GGGSAACAAARYASSW (Motif 24)

A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
Reverse Opposite:
G C A T T A G C A T C G A C G T T C A G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A T G C G T A C A G T C A G T C
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.834
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 28.4bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGSAACAAARYASSW
AGAAGAACAAAGGACTA
 A C G T A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
--GGAACAAAGR----
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGSAACAAARYASSW
ATAAGAACAAAGGACTA
 A C G T A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
--AAAACAAAGG----
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
--VRRACAAWGG----
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
--RNAACAATGG----
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
----AACAAT------
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
-----ACAAAG-----
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGSAACAAARYASSW
----RACAAWGG----
 A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGSAACAAARYASSW
NNNNNGAACAATTGANN-
 A C G T A C G T A C T G A C T G A C T G A T C G C G T A C G T A A G T C C G T A C G T A C G T A C T A G A G C T C G T A A T G C A T C G C G A T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T