Information for 13-CGGCTTTGTTCTGCTG (Motif 20)

T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
Reverse Opposite:
T G A C C G T A C A T G A G T C C G T A A C T G T G C A C T G A T A G C C G T A T C G A C T G A C A T G T G A C G A T C A C T G
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.681
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif88.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets50.4 +/- 17.8bp
Average Position of motif in Background50.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGCTTTGTTCTGCTG
--YCTTTGTTCC----
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTTGTTCTGCTG
TNNTCCTTTGTTCTNNT-
 A C G T A C G T T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTGTTCTGCTG--
-NNCTTTGTTTTGNTNNN
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTTGTTCTGCTG
NNNTCCTTTGTTCTNNN-
 A C G T A C G T T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGGCTTTGTTCTGCTG
--CCTTTGTTTT----
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGCTTTGTTCTGCTG
--CCWTTGTYYB----
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGCTTTGTTCTGCTG
---CTTTGT-------
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGGCTTTGTTCTGCTG-----
------TNTCCTGCTGTGNNG
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGGCTTTGTTCTGCTG
--CCATTGTTTT----
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGGCTTTGTTCTGCTG-----
------NNTCCTGCTGTGNNN
 T G A C C A T G A C T G G T A C A G C T A G C T A C G T A T C G A G C T A C G T G T A C C G A T T A C G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C