Information for 9-CTAAAAATTTATT (Motif 11)

A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T C A G T A C G T C T G A A C T G
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 5.8bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATTTATT
TCTAAAAATAGA--
 A C G T A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTAAAAATTTATT-
TNATTATTAATTAATTA
 A C G T A C G T A C G T A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATTTATT
ACTATAAATAGA--
 A C G T A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTAAAAATTTATT----
----AAATTAATTAATC
 A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTAAAAATTTATT------
---NAATTTTATTACCNNN
 A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTAAAAATTTATT-----
-NTNAATTTTATTGNATT
 A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTAAAAATTTATT-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTAAAAATTTATT-----
--TNAATTTTATTACCTN
 A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTAAAAATTTATT-
----TAATTGATTA
 A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAATTTATT
ATGCTAAAAATAGAA-
 A C G T A C G T A C G T A G T C A G C T C G T A G T C A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T