Information for 3-TGGVTTTTGGGAVCAG (Motif 8)

A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C T G C G A T A T G C A G T C A G T C G T C A G T C A G T C A C G T A A C G T A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.786
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 30.5bp
Average Position of motif in Background56.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGVTTTTGGGAVCAG
CAATGCATTGTGGGTA---
 A C G T A C G T A C G T A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGVTTTTGGGAVCAG
RGSMTBCTGGGAAAT-
 A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TGGVTTTTGGGAVCAG--
--------GGGAGGACNG
 A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TGGVTTTTGGGAVCAG--
--------TGGAACAGMA
 A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.50
Offset:-10
Orientation:reverse strand
Alignment:----------TGGVTTTTGGGAVCAG
NGGGGGGGGGTGGTTTGGGG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGGVTTTTGGGAVCAG
TTGACTTTT--------
 A C G T A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TGGVTTTTGGGAVCAG
----NNTTGGCANN--
 A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TGGVTTTTGGGAVCAG
NNTGTTTATTTTGGCA----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGGVTTTTGGGAVCAG-----
-GCATTCTGGGAATTGTAGTT
 A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TGGVTTTTGGGAVCAG-----
-GCMTBCTGGGAGTTGTAGTY
 A C G T A C T G C T A G T C G A A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A T A G C A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C