Information for 6-GGTTTCAAACYCY (Motif 7)

A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T
Reverse Opposite:
C T G A A C T G T C A G C T A G A C G T A C G T C G A T C T A G C G T A C G T A G T C A A G T C A T G C
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.764
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.9 +/- 27.9bp
Average Position of motif in Background48.4 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCAAACYCY
CGGTTTCAAA----
 A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTTCAAACYCY
-NATTCAAAT---
 A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCAAACYCY
AGGTCTCTAACC--
 A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCAAACYCY---
NNTTTTCACACCTTNNN
 A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCAAACYCY
TGGTTTCAGT----
 A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCAAACYCY-
AGNGTTCTAATGANN
 A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGTTTCAAACYCY-
------TAATCCCN
 A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGTTTCAAACYCY-----
-NTTGTTAATCCCTCTNN
 A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCAAACYCY-
NNNTTTNTAATACNG
 A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGTTTCAAACYCY
TNTGGTTTCGATACN-
 A C G T A C G T A C G T A T C G C T A G A C G T A C G T C G A T A G T C C G T A C G T A C G T A A G T C A G T C A G T C G A C T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G A C G T