Information for 9-GTTTTAATCT (Motif 14)

A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A G C T C G T A C G T A G T C A C G T A A G T C
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif27.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets33.2 +/- 22.8bp
Average Position of motif in Background51.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GTTTTAATCT
--TTTAAT--
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GTTTTAATCT-
---TTAATCCT
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTTTTAATCT-
---YTAATCCY
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTTTTAATCT-
---TTAATCCC
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTTTTAATCT-
---TTAATCCG
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTTTTAATCT--
--NYTAATCCYB
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTTTTAATCT
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTTTTAATCT-
ATATTAATTAA
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTAATCT------
NTTGTTAATCCCTCTNN
 A C G T A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTTTTAATCT
--TCTTATCT
 A C T G A C G T C A G T A C G T A C G T C T G A C G T A A C G T A G T C A C G T
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T