Information for 5-AATTGTCGATCAC (Motif 6)

G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C T A G G T C A A C G T A G T C A T C G G C T A A G T C C G T A G T C A A G C T A C G T
p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 20.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AATTGTCGATCAC
-SCTGTCAVTCAV
 G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATTGTCGATCAC
CTCATTGTC------
 A C G T A C G T G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AATTGTCGATCAC
-NCTGTCAATCAN
 G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AATTGTCGATCAC
--TTATCGATTA-
 G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATTGTCGATCAC
NNAATTCTCGNTNAN
 A C G T A C G T G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTCGATCAC
GGAAAAATTGTTAGGAA-
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATTGTCGATCAC
--NTATCGATTA-
 G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATTGTCGATCAC---
----GGCGACCACCGA
 G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTCGATCAC
ANNTCCATTGTTCNNN--
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AATTGTCGATCAC--
---TGTCTGDCACCT
 G T C A C T G A A C G T A C G T A C T G C A G T A T G C C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T