Information for 14-CTCCAGCAATCAC (Motif 23)

A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G C T A C G T A C T G G T A C A C G T A C T G A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 18.4bp
Average Position of motif in Background50.8 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CTCCAGCAATCAC
--TCATCAATCA-
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTCCAGCAATCAC-
--CCATCAATCAAA
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTCCAGCAATCAC
-GCCATAAATCA-
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTCCAGCAATCAC
-----CCAATCAA
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCCAGCAATCAC
-GYCATCMATCAT
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCCAGCAATCAC---
GAAGATCAATCACTTA
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCCAGCAATCAC---
GAAGATCAATCACTAA
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTCCAGCAATCAC--
-----CAAATCACTG
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCCAGCAATCAC
RGCCATYAATCA-
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCAGCAATCAC
GGCCATAAATCA-
 A G T C A C G T A G T C A G T C C G T A A C T G A G T C C G T A C T G A A C G T A G T C C G T A G T A C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T