Information for 9-GCTAGCTAGCTYG (Motif 15)

A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G
Reverse Opposite:
A G T C T C G A G T C A A C T G A G T C A G C T C T G A A T C G A T G C A C G T C G T A C T A G G T A C
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.815
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 20.9bp
Average Position of motif in Background40.5 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCTAGCTAGCTYG
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGCTAGCTYG-
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGCTAGCTYG-
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTAGCTAGCTYG-
NNNTTAGGTAGCNTNT
 A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTAGCTAGCTYG
ACTAGTTAAC---
 A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGCTAGCTYG
NTTCGCTAATTAGCTNT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

PH0074.1_Hoxd1/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCTAGCTAGCTYG-
TAAACTAATTAGCTGTA
 A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCTAGCTAGCTYG-
NNTGTAGGTAGCANNT
 A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCTAGCTAGCTYG-
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0176.1_Vsx1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGCTAGCTYG
ANTNATTAATTAACTNG
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A T C G A T G C A G C T C T G A C T A G A G T C A C G T A G C T A C T G
T C G A C G T A A C G T G A C T C T G A G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A T C C A G T A T G C C A T G