Information for 8-CGCTCGTCAGCCC (Motif 11)

A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G A T G C C G A T C T A G C T G A G T A C A C T G G T C A A C T G A G T C A T C G
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.861
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.7 +/- 26.7bp
Average Position of motif in Background43.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGTCAGCCC
GARTGGTCATCGCCC-
 A C G T A C G T A C G T A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCTCGTCAGCCC
NGCTN--------
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCGTCAGCCC
NTTATTCGTCATNC-
 A C G T A C G T A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CGCTCGTCAGCCC--
-----ATCACCCCAT
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGCTCGTCAGCCC--
-----ATCACCCCAC
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

POL002.1_INR/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGCTCGTCAGCCC-
------TCAGTCTT
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGTCAGCCC
AATGCCACGTCATC--
 A C G T A C G T A C G T A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGCTCGTCAGCCC
NSCACTYVAV---
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGCTCGTCAGCCC--
-----ATCACCCCAT
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGCTCGTCAGCCC
---ACGTCATC--
 A T G C A C T G A G T C A C G T A G T C A C T G A G C T A G T C C G T A A T C G A G T C A G T C A T G C
A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T