Information for 12-CTGTCTGTAG (Motif 23)

T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C T G A A G T C C G T A T C A G C T G A G T A C C G T A A T C G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.853
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif184.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets63.1 +/- 24.6bp
Average Position of motif in Background52.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGTAG-
TCTATTTATAGN
 A C G T T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGTCTGTAG
CTGTCTGG--
 T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGTAG-
GCTATTTATAGC
 A C G T T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGTAG
VBSYGTCTGG--
 A C G T A C G T T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGTAG-
TCTATTTTTAGA
 A C G T T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGTAG---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGTCTGTAG
TWGTCTGV--
 T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGTCTGTAG---
--GTCTGTGGTTT
 T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGTCTGTAG----
--NNHTGTGGTTWN
 T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGTAG-----
NNTGTAGGTAGCANNT
 A C G T T A G C C G A T A C T G A G C T A G T C A C G T A C T G A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T