Information for 13-TCAGCTGGAGAAA (Motif 12)

A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A T G C A G T C C G T A A C T G A G T C A C G T A C T G G T C A
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 20.5bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGGAGAAA
NAHCAGCTGD-----
 A C G T A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCAGCTGGAGAAA
GACAGCTGCAG---
 A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAGCTGGAGAAA
AACAGCTGCAG---
 A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCAGCTGGAGAAA
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGGAGAAA
NAACAGCTGG-----
 A C G T A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCAGCTGGAGAAA
NCAGCTGCTG---
 A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCAGCTGGAGAAA
-CAGCTGNT----
 A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCTGGAGAAA
NGNGACAGCTGCN----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGCTGGAGAAA
NNVVCAGCTGBN----
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTGGAGAAA
NNACAGCTGC-----
 A C G T A C G T A C G T A G T C G T C A A C T G G T A C A C G T A C T G A T C G C G T A A C T G C G T A C G T A C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T