Information for 14-GCATAGCAGCGCC (Motif 21)

A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.498e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 21.0bp
Average Position of motif in Background62.5 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCATAGCAGCGCC
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCATAGCAGCGCC
TACCATAGCAACGGT
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCATAGCAGCGCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCATAGCAGCGCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCATAGCAGCGCC----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCATAGCAGCGCC--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATAGCAGCGCC
SCCTAGCAACAG-
 A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCATAGCAGCGCC-
ADGGYAGYAGCATCT
 A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCATAGCAGCGCC---
NNNANTGCAGTGCNNTT
 A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCATAGCAGCGCC
TGTTKCCTAGCAACM--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T