Information for 10-CCGCSGCTTTTTCCCC (Motif 17)

A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C
Reverse Opposite:
A T C G T A C G A C T G T A C G T G C A C G T A C G T A C G T A C T G A A C T G G T A C A T C G C T A G A G T C T A C G A C T G
p-value:1e-7
log p-value:-1.774e+01
Information Content per bp:1.812
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 21.9bp
Average Position of motif in Background59.2 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGCSGCTTTTTCCCC
TACTTCCGCTTTTT----
 A C G T A C G T A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCGCSGCTTTTTCCCC---
-------TTTTCGCGCGAA
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCGCSGCTTTTTCCCC--
------VDTTTCCCGCCA
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

SPIC/MA0687.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCGCSGCTTTTTCCCC
TACTTCCTCTTTTN----
 A C G T A C G T A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCGCSGCTTTTTCCCC
-----YCTTTGTTCC-
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCGCSGCTTTTTCCCC-
-------DTTTCCCGCC
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCGCSGCTTTTTCCCC---
-----TTTTTTTTCNNGTN
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCGCSGCTTTTTCCCC-
---TGACCTTTGCCCCA
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CCGCSGCTTTTTCCCC
--------TTTTCCA-
 A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CCGCSGCTTTTTCCCC
ATGCCACGCCCCTTTTTG---
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C T G A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A T G C
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G A C G T A C G T A C G T