Information for 1-CCTTGAGGCTCCVCVT (Motif 2)

A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
Reverse Opposite:
C T G A A C T G A C T G A T C G C T A G A C T G C G T A A C T G A G T C A G T C A G C T G T A C C G T A C T G A A C T G C T A G
p-value:1e-16
log p-value:-3.840e+01
Information Content per bp:1.802
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 19.4bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTTGAGGCTCCVCVT
ATGCCCTGAGGC-------
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CCTTGAGGCTCCVCVT
-------GCTCCG---
 A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGAGGCTCCVCVT
NGCCTGAGGCN------
 A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGAGGCTCCVCVT
NGCCTNAGGCN------
 A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGAGGCTCCVCVT
TGCCCTNGGGCA------
 A C G T A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGAGGCTCCVCVT
TGCCTGAGGCN------
 A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAGGCTCCVCVT
WTGSCCTSAGGS-------
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGAGGCTCCVCVT
TGCCCTNGGGCA------
 A C G T A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAGGCTCCVCVT
NTGCCCTAGGGCAA-----
 A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTGAGGCTCCVCVT
TGCCCCCGGGCA------
 A C G T A C G T A G T C A G T C A G C T A C G T A C T G C T G A A C T G A C T G A G T C C G A T A G T C A G T C T A G C A G T C T G A C A G C T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T